For the comprehensive evaluation of multi station integrated energy system, considering the characteristics of power grid enterprises, a multi index comprehensive evaluation method based on analytic hierarchy process and risk entropy weight is proposed. In this paper, social responsibility and risk control are taken as key indicators, together with energy utilization, cost-effectiveness and energy coupling efficiency as subsystem index set, and the top-level index set is composed of subsystem comprehensive evaluation scores; The baseline network method is used to normalize the index set of each layer, the analytic hierarchy process and risk entropy weight method are used to solve the subjective and objective weights of the index set of each layer, and then their comprehensive weight vectors are calculated; The comprehensive score of subsystem and the comprehensive evaluation results of multi station integrated energy system are obtained by weighted calculation in turn. Through the example analysis, it is verified that the comprehensive evaluation method proposed in this paper can objectively and comprehensively evaluate the operation of multi station integrated energy system, and assist it in the optimization of operation mode and operation strategy.